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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs113193404 chr1:16184640 G/A 0.000183 488 15.3 17.33 17.77 KM Plot
THCA rs113193500 chr10:81816776 C/T 0.000253 489 16.2 15.9 11.73 KM Plot
THCA rs1131941 chr14:24760808 C/T 0.000303 486 16.08 15.3 17.13 KM Plot
THCA rs113238971 chr15:66622437 G/A 0.000235 480 16.38 14.8 20.77 KM Plot
THCA rs113248299 chr4:88205868 G/A 0.000275 486 16.2 15.33 11.33 KM Plot
THCA rs113286263 chr4:57185763 C/G 9.56E-8 487 16.02 15.98 12.67 KM Plot
THCA rs113295096 chr14:23197172 G/A 1.56E-6 487 15.2 17.1 21.67 KM Plot
THCA rs113300493 chr17:57371991 GTGGTTTGGTT/G 9.83E-7 478 15.9 15.73 27.47 KM Plot
THCA rs113304525 chr10:104842536 G/GTC 5.04E-9 490 15.27 17.63 32.1 KM Plot
THCA rs113309606 chr5:96202763 G/A 3.31E-6 487 15.17 16.9 20.83 KM Plot
THCA rs113310156 chr9:132297549 G/A 0 485 16.2 15.08 9.57 KM Plot
THCA rs113320965 chr10:104656315 C/T 5.2E-9 489 15.17 17.73 32.1 KM Plot
THCA rs11332279 chr6:79553636 CA/C 5.42E-6 490 18.8 16.98 15.68 KM Plot
THCA rs113325155 chr3:96781898 A/T 2.19E-10 489 15.87 15.17 24.65 KM Plot
THCA rs1133526 chr6:24423424 G/A 5.55E-15 488 16.37 14.85 11.07 KM Plot